Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 LETM1P2-201ENST00000597330 2178 ntBASIC12.27□□□□□ -0.45
LYRM9A8MSI8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LYRM9A8MSI8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 PCDHB18P-201ENST00000524813 2368 ntBASIC12.26□□□□□ -0.45
LYRM9A8MSI8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 HLA-A-201ENST00000376802 1334 ntBASIC12.26□□□□□ -0.45
LYRM9A8MSI8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 AC006504.4-201ENST00000592118 1568 ntBASIC12.26□□□□□ -0.45
LYRM9A8MSI8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.26□□□□□ -0.45
LYRM9A8MSI8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 AC073621.1-201ENST00000392730 636 ntBASIC12.25□□□□□ -0.45
LYRM9A8MSI8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LYRM9A8MSI8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms