Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 FRMD8P1-201ENST00000440433 1524 ntBASIC13.86□□□□□ -0.19
SRRM4A7MD48 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.86□□□□□ -0.19
SRRM4A7MD48 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.86□□□□□ -0.19
SRRM4A7MD48 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 UBALD1-205ENST00000590891 2641 ntBASIC13.86□□□□□ -0.19
SRRM4A7MD48 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRRM4A7MD48 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 AL020989.1-201ENST00000422979 469 ntBASIC13.85□□□□□ -0.19
SRRM4A7MD48 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 ABCD1P5-201ENST00000445663 754 ntBASIC13.85□□□□□ -0.19
SRRM4A7MD48 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 GPR89P-201ENST00000407924 1495 ntBASIC13.85□□□□□ -0.19
SRRM4A7MD48 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 AL118508.1-201ENST00000613502 2345 ntBASIC13.85□□□□□ -0.19
SRRM4A7MD48 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRRM4A7MD48 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.85□□□□□ -0.19
SRRM4A7MD48 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.84□□□□□ -0.19
SRRM4A7MD48 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRRM4A7MD48 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms