Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.48■□□□□ 0.39
CAPN8A6NHC0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 SIGLEC30P-201ENST00000455569 941 ntBASIC17.48■□□□□ 0.39
CAPN8A6NHC0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 AL022326.1-202ENST00000641533 845 ntBASIC17.48■□□□□ 0.39
CAPN8A6NHC0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN8A6NHC0 PMS2P7-201ENST00000506558 1336 ntBASIC17.47■□□□□ 0.39
CAPN8A6NHC0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 AP001005.1-201ENST00000571755 1248 ntBASIC17.47■□□□□ 0.39
CAPN8A6NHC0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN8A6NHC0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 AP001094.4-201ENST00000579008 2176 ntBASIC17.46■□□□□ 0.39
CAPN8A6NHC0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CAPN8A6NHC0 MRPL3P1-201ENST00000400109 1033 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms