Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.01□□□□□ -0.01
MBD3L3A6NE82 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L3A6NE82 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L3A6NE82 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.01□□□□□ -0.01
MBD3L3A6NE82 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
MBD3L3A6NE82 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.01□□□□□ -0.01
MBD3L3A6NE82 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
MBD3L3A6NE82 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15□□□□□ -0.01
MBD3L3A6NE82 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15□□□□□ -0.01
MBD3L3A6NE82 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15□□□□□ -0.01
MBD3L3A6NE82 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15□□□□□ -0.01
MBD3L3A6NE82 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15□□□□□ -0.01
MBD3L3A6NE82 AKAP8P1-201ENST00000434743 1349 ntBASIC15□□□□□ -0.01
MBD3L3A6NE82 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15□□□□□ -0.01
MBD3L3A6NE82 HMGN1P19-201ENST00000436976 333 ntBASIC15□□□□□ -0.01
MBD3L3A6NE82 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15□□□□□ -0.01
MBD3L3A6NE82 TIMM8BP1-201ENST00000452384 211 ntBASIC15□□□□□ -0.01
MBD3L3A6NE82 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15□□□□□ -0.01
MBD3L3A6NE82 AC023141.5-201ENST00000458585 616 ntBASIC15□□□□□ -0.01
MBD3L3A6NE82 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15□□□□□ -0.01
MBD3L3A6NE82 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15□□□□□ -0.01
MBD3L3A6NE82 DUX4L17-201ENST00000557360 1267 ntBASIC15□□□□□ -0.01
MBD3L3A6NE82 RARRES2P8-201ENST00000566335 367 ntBASIC15□□□□□ -0.01
MBD3L3A6NE82 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 CD7-202ENST00000578509 925 ntTSL 3 BASIC15□□□□□ -0.01
MBD3L3A6NE82 AL009183.1-201ENST00000603760 355 ntBASIC15□□□□□ -0.01
MBD3L3A6NE82 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15□□□□□ -0.01
MBD3L3A6NE82 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15□□□□□ -0.01
MBD3L3A6NE82 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MBD3L3A6NE82 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
MBD3L3A6NE82 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15□□□□□ -0.01
MBD3L3A6NE82 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MBD3L3A6NE82 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
MBD3L3A6NE82 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
MBD3L3A6NE82 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
MBD3L3A6NE82 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15□□□□□ -0.01
MBD3L3A6NE82 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15□□□□□ -0.01
MBD3L3A6NE82 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 FRMD8P1-201ENST00000440433 1524 ntBASIC14.99□□□□□ -0.01
MBD3L3A6NE82 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 SPDYE11-202ENST00000450699 704 ntBASIC14.99□□□□□ -0.01
MBD3L3A6NE82 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 CYMP-203ENST00000474680 1263 ntBASIC14.99□□□□□ -0.01
MBD3L3A6NE82 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.99□□□□□ -0.01
MBD3L3A6NE82 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 SPDYE9P-201ENST00000570642 692 ntBASIC14.99□□□□□ -0.01
MBD3L3A6NE82 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 SPDYE10P-202ENST00000612005 668 ntBASIC14.99□□□□□ -0.01
MBD3L3A6NE82 SPDYE8P-202ENST00000612377 668 ntBASIC14.99□□□□□ -0.01
MBD3L3A6NE82 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.99□□□□□ -0.01
MBD3L3A6NE82 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 AL021920.2-201ENST00000624828 1351 ntBASIC14.98□□□□□ -0.01
MBD3L3A6NE82 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MBD3L3A6NE82 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms