Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.53□□□□□ -0.4
TRGV1A0A0A0MS02 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.52□□□□□ -0.4
TRGV1A0A0A0MS02 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.52□□□□□ -0.4
TRGV1A0A0A0MS02 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TRGV1A0A0A0MS02 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.52□□□□□ -0.4
TRGV1A0A0A0MS02 AL049757.1-201ENST00000616842 1596 ntBASIC12.52□□□□□ -0.4
TRGV1A0A0A0MS02 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.52□□□□□ -0.4
TRGV1A0A0A0MS02 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRGV1A0A0A0MS02 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
TRGV1A0A0A0MS02 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRGV1A0A0A0MS02 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRGV1A0A0A0MS02 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 KLF4P1-201ENST00000412782 1185 ntBASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 STK19B-204ENST00000512515 211 ntBASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 AC080080.1-201ENST00000625121 2420 ntBASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRGV1A0A0A0MS02 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 NUS1P2-201ENST00000417358 873 ntBASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 UPK3BP1-201ENST00000428678 509 ntBASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 AC012615.1-201ENST00000565797 1299 ntBASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 BNIP3P18-201ENST00000593976 575 ntBASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRGV1A0A0A0MS02 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms