Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB4X5D2U9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB4X5D2U9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.02□□□□□ -0.33
HLA-DRB4X5D2U9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB4X5D2U9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
HLA-DRB4X5D2U9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DRB4X5D2U9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
HLA-DRB4X5D2U9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 LYSMD4-203ENST00000378904 2122 ntBASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-DRB4X5D2U9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 PP12613-201ENST00000424958 2230 ntBASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 AC099336.1-202ENST00000602961 463 ntBASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 PKD1P5-201ENST00000532415 10291 ntBASIC13□□□□□ -0.33
HLA-DRB4X5D2U9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms