Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RCL1Q9Y2P8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 PVRIG2P-201ENST00000435460 978 ntBASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 BX088651.1-201ENST00000540551 451 ntBASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 AC092364.2-201ENST00000596710 2692 ntBASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RCL1Q9Y2P8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 AC105917.1-201ENST00000506637 2539 ntBASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 AC023824.1-201ENST00000562945 2975 ntBASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 AC124947.2-201ENST00000547118 1133 ntBASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 MIR3917-201ENST00000580971 93 ntBASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RCL1Q9Y2P8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RCL1Q9Y2P8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms