Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RHOQP3-201ENST00000437982 621 ntBASIC18.13■□□□□ 0.49
CDH9Q9ULB4 FAM185BP-201ENST00000443595 716 ntBASIC18.13■□□□□ 0.49
CDH9Q9ULB4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH9Q9ULB4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 AC004832.2-201ENST00000426397 482 ntBASIC18.12■□□□□ 0.49
CDH9Q9ULB4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 AC092865.5-201ENST00000545435 363 ntBASIC18.12■□□□□ 0.49
CDH9Q9ULB4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH9Q9ULB4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 PP12613-201ENST00000424958 2230 ntBASIC18.11■□□□□ 0.49
CDH9Q9ULB4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 KRT18P13-201ENST00000400056 1290 ntBASIC18.11■□□□□ 0.49
CDH9Q9ULB4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 AC007064.4-201ENST00000637740 555 ntBASIC18.11■□□□□ 0.49
CDH9Q9ULB4 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH9Q9ULB4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 LINC02012-201ENST00000608206 1725 ntBASIC18.1■□□□□ 0.49
CDH9Q9ULB4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.1■□□□□ 0.49
CDH9Q9ULB4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 YBX2P1-201ENST00000394192 760 ntBASIC18.1■□□□□ 0.49
CDH9Q9ULB4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH9Q9ULB4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms