Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CLIP2Q9UDT6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.42■□□□□ 0.86
CLIP2Q9UDT6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.42■□□□□ 0.86
CLIP2Q9UDT6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLIP2Q9UDT6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIP2Q9UDT6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIP2Q9UDT6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLIP2Q9UDT6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 AC009947.1-201ENST00000444350 727 ntBASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 PMS2P7-201ENST00000506558 1336 ntBASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 AC006116.8-202ENST00000587620 1550 ntBASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 AD000864.1-201ENST00000624076 2295 ntBASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CLIP2Q9UDT6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 ELK2BP-201ENST00000415014 1224 ntBASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 TNRC18P3-201ENST00000441896 2691 ntBASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 AC140113.2-201ENST00000604370 208 ntBASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 AC027601.4-201ENST00000611259 610 ntBASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 PGM5P2-202ENST00000637225 1043 ntBASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.4■□□□□ 0.86
CLIP2Q9UDT6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CLIP2Q9UDT6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLIP2Q9UDT6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.39■□□□□ 0.86
CLIP2Q9UDT6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLIP2Q9UDT6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLIP2Q9UDT6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CLIP2Q9UDT6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.39■□□□□ 0.86
CLIP2Q9UDT6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLIP2Q9UDT6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.39■□□□□ 0.85
CLIP2Q9UDT6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIP2Q9UDT6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIP2Q9UDT6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIP2Q9UDT6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
CLIP2Q9UDT6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms