Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.23■□□□□ 0.51
ARHGEF3Q9NR81 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 AC011270.2-201ENST00000624293 2550 ntBASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 CNN2P11-201ENST00000429351 262 ntBASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF3Q9NR81 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 AL645939.2-201ENST00000427340 991 ntBASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 HTR5BP-201ENST00000430851 1154 ntBASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 PRYP5-201ENST00000451909 266 ntBASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 AC092364.2-202ENST00000597012 1073 ntBASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 AC004817.3-201ENST00000602957 2129 ntBASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 C20orf181-201ENST00000623918 480 ntBASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 AL499627.1-201ENST00000569373 2188 ntBASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF3Q9NR81 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ARHGEF3Q9NR81 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms