Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GCM1Q9NP62 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GCM1Q9NP62 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.75□□□□□ -0.05
GCM1Q9NP62 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.75□□□□□ -0.05
GCM1Q9NP62 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 PRYP5-201ENST00000451909 266 ntBASIC14.74□□□□□ -0.05
GCM1Q9NP62 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 AC073648.2-201ENST00000510116 352 ntBASIC14.74□□□□□ -0.05
GCM1Q9NP62 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 AL022326.1-202ENST00000641533 845 ntBASIC14.74□□□□□ -0.05
GCM1Q9NP62 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.74□□□□□ -0.05
GCM1Q9NP62 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GCM1Q9NP62 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 AC046185.3-201ENST00000623228 1824 ntBASIC14.73□□□□□ -0.05
GCM1Q9NP62 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 AC012313.1-201ENST00000593393 3059 ntBASIC14.73□□□□□ -0.05
GCM1Q9NP62 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 AC026396.1-201ENST00000419388 421 ntBASIC14.73□□□□□ -0.05
GCM1Q9NP62 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 AF186996.4-201ENST00000467186 377 ntBASIC14.73□□□□□ -0.05
GCM1Q9NP62 RNPS1P1-201ENST00000507437 918 ntBASIC14.73□□□□□ -0.05
GCM1Q9NP62 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 AC021087.4-201ENST00000563761 564 ntBASIC14.73□□□□□ -0.05
GCM1Q9NP62 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 MTDHP4-201ENST00000600287 670 ntBASIC14.73□□□□□ -0.05
GCM1Q9NP62 AC064862.7-201ENST00000604520 867 ntBASIC14.73□□□□□ -0.05
GCM1Q9NP62 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 AC020916.1-201ENST00000587762 1774 ntBASIC14.73□□□□□ -0.05
GCM1Q9NP62 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GCM1Q9NP62 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
GCM1Q9NP62 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 LINC00896-202ENST00000609602 2128 ntBASIC14.72□□□□□ -0.05
GCM1Q9NP62 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
GCM1Q9NP62 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GCM1Q9NP62 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms