Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 NSUN5P1-202ENST00000421140 1535 ntBASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 NSUN5P2-203ENST00000457352 1529 ntBASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCDC68Q9H2F9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 AL445228.2-201ENST00000605589 952 ntBASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC68Q9H2F9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 AC003669.1-201ENST00000334569 611 ntBASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 MIR1224-201ENST00000408193 85 ntBASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 KLF4P1-201ENST00000412782 1185 ntBASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 STK25P1-201ENST00000585406 838 ntBASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 AC010331.1-201ENST00000611423 582 ntBASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 AL353593.2-201ENST00000602529 1483 ntBASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 AC116353.5-201ENST00000638148 1699 ntBASIC17.29■□□□□ 0.36
CCDC68Q9H2F9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC68Q9H2F9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms