Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 AK4P3-201ENST00000418260 669 ntBASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 AC092647.4-201ENST00000457211 535 ntBASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 AC083849.1-201ENST00000615227 514 ntBASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 AL139384.1-201ENST00000612143 3047 ntBASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 AL049757.1-201ENST00000616842 1596 ntBASIC14.56□□□□□ -0.08
HDHD3Q9BSH5 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 AC046158.3-201ENST00000624947 2558 ntBASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 AC005336.2-201ENST00000593183 939 ntBASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 AC125634.1-201ENST00000438758 1403 ntBASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 KRT8P10-201ENST00000450021 1447 ntBASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 EGFEM1P-202ENST00000431685 1563 ntBASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HDHD3Q9BSH5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HDHD3Q9BSH5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms