Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV9Q99603 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
TRGV9Q99603 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.44□□□□□ -0.26
TRGV9Q99603 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRGV9Q99603 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
TRGV9Q99603 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
TRGV9Q99603 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRGV9Q99603 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.44□□□□□ -0.26
TRGV9Q99603 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV9Q99603 AC246785.2-201ENST00000432512 513 ntBASIC13.44□□□□□ -0.26
TRGV9Q99603 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRGV9Q99603 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.44□□□□□ -0.26
TRGV9Q99603 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.44□□□□□ -0.26
TRGV9Q99603 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.44□□□□□ -0.26
TRGV9Q99603 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.44□□□□□ -0.26
TRGV9Q99603 AC009533.2-201ENST00000543664 586 ntBASIC13.44□□□□□ -0.26
TRGV9Q99603 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
TRGV9Q99603 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV9Q99603 IGHV3-41-201ENST00000613121 348 ntBASIC13.44□□□□□ -0.26
TRGV9Q99603 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.44□□□□□ -0.26
TRGV9Q99603 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRGV9Q99603 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRGV9Q99603 AC066615.1-201ENST00000640911 628 ntBASIC13.44□□□□□ -0.26
TRGV9Q99603 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRGV9Q99603 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV9Q99603 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TRGV9Q99603 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRGV9Q99603 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV9Q99603 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV9Q99603 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.44□□□□□ -0.26
TRGV9Q99603 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV9Q99603 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV9Q99603 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.43□□□□□ -0.26
TRGV9Q99603 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRGV9Q99603 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV9Q99603 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
TRGV9Q99603 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
TRGV9Q99603 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV9Q99603 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.43□□□□□ -0.26
TRGV9Q99603 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 AL845331.1-201ENST00000424978 1190 ntBASIC13.43□□□□□ -0.26
TRGV9Q99603 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.43□□□□□ -0.26
TRGV9Q99603 AL671277.2-201ENST00000458060 996 ntBASIC13.43□□□□□ -0.26
TRGV9Q99603 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.43□□□□□ -0.26
TRGV9Q99603 AC063952.2-201ENST00000498792 1227 ntBASIC13.43□□□□□ -0.26
TRGV9Q99603 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.43□□□□□ -0.26
TRGV9Q99603 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
TRGV9Q99603 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV9Q99603 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRGV9Q99603 LINC01238-205ENST00000567549 1107 ntBASIC13.43□□□□□ -0.26
TRGV9Q99603 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV9Q99603 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV9Q99603 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV9Q99603 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV9Q99603 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV9Q99603 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV9Q99603 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV9Q99603 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV9Q99603 TUBB8P12-201ENST00000308911 1335 ntBASIC13.42□□□□□ -0.26
TRGV9Q99603 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms