Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CRAMP1Q96RY5 AC133963.1-201ENST00000504166 1679 ntBASIC20.85■□□□□ 0.93
CRAMP1Q96RY5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.85■□□□□ 0.93
CRAMP1Q96RY5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CRAMP1Q96RY5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.85■□□□□ 0.93
CRAMP1Q96RY5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.85■□□□□ 0.93
CRAMP1Q96RY5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CRAMP1Q96RY5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CRAMP1Q96RY5 AC104581.1-202ENST00000635932 2618 ntBASIC20.85■□□□□ 0.93
CRAMP1Q96RY5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CRAMP1Q96RY5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CRAMP1Q96RY5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CRAMP1Q96RY5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 AC004890.2-204ENST00000481968 304 ntBASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 MIR4453-201ENST00000584019 89 ntBASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CRAMP1Q96RY5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.83■□□□□ 0.93
CRAMP1Q96RY5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CRAMP1Q96RY5 EGFEM1P-202ENST00000431685 1563 ntBASIC20.83■□□□□ 0.92
CRAMP1Q96RY5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CRAMP1Q96RY5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.83■□□□□ 0.92
CRAMP1Q96RY5 AC016027.1-202ENST00000607927 1699 ntBASIC20.83■□□□□ 0.92
CRAMP1Q96RY5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 AC241585.1-201ENST00000433527 519 ntBASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 AL138918.1-201ENST00000568306 659 ntBASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 AP001350.2-201ENST00000625104 1094 ntBASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CRAMP1Q96RY5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 AL355312.1-201ENST00000407115 2176 ntBASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.81■□□□□ 0.92
CRAMP1Q96RY5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms