Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.37■□□□□ 0.85
NEK1Q96PY6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NEK1Q96PY6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.37■□□□□ 0.85
NEK1Q96PY6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NEK1Q96PY6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NEK1Q96PY6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NEK1Q96PY6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.37■□□□□ 0.85
NEK1Q96PY6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEK1Q96PY6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEK1Q96PY6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.37■□□□□ 0.85
NEK1Q96PY6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.37■□□□□ 0.85
NEK1Q96PY6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.37■□□□□ 0.85
NEK1Q96PY6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NEK1Q96PY6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NEK1Q96PY6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.36■□□□□ 0.85
NEK1Q96PY6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NEK1Q96PY6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.36■□□□□ 0.85
NEK1Q96PY6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.36■□□□□ 0.85
NEK1Q96PY6 AC011676.5-201ENST00000624864 2660 ntBASIC20.36■□□□□ 0.85
NEK1Q96PY6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
NEK1Q96PY6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.36■□□□□ 0.85
NEK1Q96PY6 AL353135.1-201ENST00000606729 504 ntBASIC20.36■□□□□ 0.85
NEK1Q96PY6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.36■□□□□ 0.85
NEK1Q96PY6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NEK1Q96PY6 NCF1C-201ENST00000438382 1427 ntBASIC20.36■□□□□ 0.85
NEK1Q96PY6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.35■□□□□ 0.85
NEK1Q96PY6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.35■□□□□ 0.85
NEK1Q96PY6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
NEK1Q96PY6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.35■□□□□ 0.85
NEK1Q96PY6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.35■□□□□ 0.85
NEK1Q96PY6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
NEK1Q96PY6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
NEK1Q96PY6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NEK1Q96PY6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
NEK1Q96PY6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NEK1Q96PY6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
NEK1Q96PY6 AL590787.1-201ENST00000568856 1315 ntBASIC20.34■□□□□ 0.85
NEK1Q96PY6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.34■□□□□ 0.85
NEK1Q96PY6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.34■□□□□ 0.85
NEK1Q96PY6 MTDHP4-201ENST00000600287 670 ntBASIC20.34■□□□□ 0.85
NEK1Q96PY6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.34■□□□□ 0.85
NEK1Q96PY6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.34■□□□□ 0.85
NEK1Q96PY6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
NEK1Q96PY6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.34■□□□□ 0.85
NEK1Q96PY6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NEK1Q96PY6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NEK1Q96PY6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.33■□□□□ 0.85
NEK1Q96PY6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.33■□□□□ 0.85
NEK1Q96PY6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NEK1Q96PY6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NEK1Q96PY6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NEK1Q96PY6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NEK1Q96PY6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.33■□□□□ 0.85
NEK1Q96PY6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NEK1Q96PY6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.85
NEK1Q96PY6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
NEK1Q96PY6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NEK1Q96PY6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NEK1Q96PY6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms