Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 TOP3BP1-201ENST00000420768 1380 ntBASIC19.96■□□□□ 0.79
CCDC17Q96LX7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 AL353732.1-201ENST00000569618 1459 ntBASIC19.96■□□□□ 0.79
CCDC17Q96LX7 HTR7P1-202ENST00000624664 4411 ntBASIC19.96■□□□□ 0.79
CCDC17Q96LX7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC17Q96LX7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.79
CCDC17Q96LX7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
CCDC17Q96LX7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 HMGA1P7-201ENST00000406908 502 ntBASIC19.95■□□□□ 0.78
CCDC17Q96LX7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 AC091167.2-201ENST00000579581 588 ntBASIC19.95■□□□□ 0.78
CCDC17Q96LX7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 AL513210.1-201ENST00000629608 234 ntBASIC19.95■□□□□ 0.78
CCDC17Q96LX7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 AC012569.1-201ENST00000591191 1524 ntBASIC19.95■□□□□ 0.78
CCDC17Q96LX7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 KRT18P28-201ENST00000453838 1332 ntBASIC19.95■□□□□ 0.78
CCDC17Q96LX7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC17Q96LX7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 HCG4-201ENST00000418983 998 ntBASIC19.94■□□□□ 0.78
CCDC17Q96LX7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 AC105339.1-204ENST00000636249 355 ntBASIC19.94■□□□□ 0.78
CCDC17Q96LX7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC17Q96LX7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 FRMD8P1-201ENST00000440433 1524 ntBASIC19.93■□□□□ 0.78
CCDC17Q96LX7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.93■□□□□ 0.78
CCDC17Q96LX7 DUX4L17-201ENST00000557360 1267 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms