Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 KRT18P3-201ENST00000451602 1288 ntBASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 PGAM5P1-201ENST00000518923 814 ntBASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 REXO1L3P-201ENST00000622202 1288 ntBASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.16■□□□□ 0.34
ECHDC3Q96DC8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 AC108860.2-201ENST00000562760 2183 ntBASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 KRT18P2-201ENST00000447938 1258 ntBASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 POLD2P1-201ENST00000511220 997 ntBASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 AC107918.2-201ENST00000530817 355 ntBASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 AC129492.6-201ENST00000611383 1305 ntBASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ECHDC3Q96DC8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.14■□□□□ 0.34
ECHDC3Q96DC8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.14■□□□□ 0.34
ECHDC3Q96DC8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 RNA5SP416-201ENST00000516838 111 ntBASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ECHDC3Q96DC8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.13■□□□□ 0.33
ECHDC3Q96DC8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ECHDC3Q96DC8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ECHDC3Q96DC8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ECHDC3Q96DC8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.13■□□□□ 0.33
ECHDC3Q96DC8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ECHDC3Q96DC8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ECHDC3Q96DC8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ECHDC3Q96DC8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ECHDC3Q96DC8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ECHDC3Q96DC8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
ECHDC3Q96DC8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ECHDC3Q96DC8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms