Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
FOXRED1Q96CU9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.03■□□□□ -0
FOXRED1Q96CU9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.03■□□□□ -0
FOXRED1Q96CU9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
FOXRED1Q96CU9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.03■□□□□ -0
FOXRED1Q96CU9 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.03■□□□□ -0
FOXRED1Q96CU9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.03■□□□□ -0
FOXRED1Q96CU9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FOXRED1Q96CU9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FOXRED1Q96CU9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.03■□□□□ -0
FOXRED1Q96CU9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FOXRED1Q96CU9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
FOXRED1Q96CU9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
FOXRED1Q96CU9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.03■□□□□ -0
FOXRED1Q96CU9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
FOXRED1Q96CU9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.02■□□□□ -0
FOXRED1Q96CU9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 AL353692.3-201ENST00000407031 1396 ntBASIC15.02■□□□□ -0
FOXRED1Q96CU9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
FOXRED1Q96CU9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.02■□□□□ -0
FOXRED1Q96CU9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.02■□□□□ -0
FOXRED1Q96CU9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
FOXRED1Q96CU9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
FOXRED1Q96CU9 IGHGP-201ENST00000390555 1178 ntBASIC15.02■□□□□ -0
FOXRED1Q96CU9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.02■□□□□ -0
FOXRED1Q96CU9 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.02■□□□□ -0
FOXRED1Q96CU9 AP003733.1-201ENST00000491725 852 ntBASIC15.02■□□□□ -0
FOXRED1Q96CU9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.02■□□□□ -0
FOXRED1Q96CU9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.02■□□□□ -0
FOXRED1Q96CU9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.02■□□□□ -0
FOXRED1Q96CU9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
FOXRED1Q96CU9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 SLC25A1P3-201ENST00000395415 828 ntBASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 AL359075.1-203ENST00000462729 1002 ntBASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 ZNF444P1-201ENST00000559497 298 ntBASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 AC087388.1-201ENST00000571370 1112 ntBASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FOXRED1Q96CU9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms