Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 NTF6B-201ENST00000591913 560 ntBASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATG4AQ8WYN0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 STK19B-204ENST00000512515 211 ntBASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 AC005332.1-201ENST00000577698 1310 ntBASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 AC016734.2-201ENST00000624325 1377 ntBASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 AC008894.3-201ENST00000624324 3103 ntBASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ATG4AQ8WYN0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 AL662844.4-201ENST00000606367 2838 ntBASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 AC246785.2-201ENST00000432512 513 ntBASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 FRMD8P1-201ENST00000440433 1524 ntBASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 AC011467.2-201ENST00000598425 242 ntBASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATG4AQ8WYN0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.84■□□□□ 0.45
ATG4AQ8WYN0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.84■□□□□ 0.45
ATG4AQ8WYN0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.84■□□□□ 0.45
ATG4AQ8WYN0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.84■□□□□ 0.45
ATG4AQ8WYN0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.84■□□□□ 0.45
ATG4AQ8WYN0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.84■□□□□ 0.45
ATG4AQ8WYN0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATG4AQ8WYN0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
ATG4AQ8WYN0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATG4AQ8WYN0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATG4AQ8WYN0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.84■□□□□ 0.45
ATG4AQ8WYN0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms