Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 SLC25A6P5-201ENST00000435663 894 ntBASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 AC005225.4-201ENST00000557330 545 ntBASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 FO538757.1-201ENST00000623083 1397 ntBASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 MRPS18AP1-201ENST00000414458 589 ntBASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 MEIS3P1-201ENST00000495167 958 ntBASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 FAM86C2P-203ENST00000528684 1004 ntBASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC6AQ8NDV7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 CNN2P2-201ENST00000443536 909 ntBASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 CNN2P3-201ENST00000450201 906 ntBASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 AC125807.1-201ENST00000483097 614 ntBASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 MIR4515-201ENST00000584082 81 ntBASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 AL136317.3-201ENST00000618497 906 ntBASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 LINC01451-201ENST00000623792 534 ntBASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 AL645728.2-201ENST00000641974 660 ntBASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 WASH6P-202ENST00000359512 1437 ntBASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 SPDYE14P-201ENST00000442619 822 ntBASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 CRB3P1-201ENST00000449338 276 ntBASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC6AQ8NDV7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 AL133373.2-201ENST00000623187 2828 ntBASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.54■□□□□ 0.08
TNRC6AQ8NDV7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms