Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 AC073648.2-201ENST00000510116 352 ntBASIC13.93□□□□□ -0.18
LINC00311Q8N616 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.93□□□□□ -0.18
LINC00311Q8N616 DUX4L17-201ENST00000557360 1267 ntBASIC13.93□□□□□ -0.18
LINC00311Q8N616 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 AL121912.1-201ENST00000603683 238 ntBASIC13.93□□□□□ -0.18
LINC00311Q8N616 AF228730.7-201ENST00000641842 219 ntBASIC13.93□□□□□ -0.18
LINC00311Q8N616 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 FZD10-202ENST00000539839 3282 ntBASIC13.93□□□□□ -0.18
LINC00311Q8N616 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 AC243591.1-201ENST00000452967 1364 ntBASIC13.93□□□□□ -0.18
LINC00311Q8N616 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 AC022211.2-201ENST00000585075 2527 ntBASIC13.93□□□□□ -0.18
LINC00311Q8N616 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00311Q8N616 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.93□□□□□ -0.18
LINC00311Q8N616 AC105020.1-201ENST00000435356 2205 ntBASIC13.92□□□□□ -0.18
LINC00311Q8N616 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.92□□□□□ -0.18
LINC00311Q8N616 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.92□□□□□ -0.18
LINC00311Q8N616 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00311Q8N616 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00311Q8N616 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00311Q8N616 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC00311Q8N616 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00311Q8N616 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
LINC00311Q8N616 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00311Q8N616 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00311Q8N616 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC00311Q8N616 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC00311Q8N616 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC00311Q8N616 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00311Q8N616 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00311Q8N616 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00311Q8N616 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00311Q8N616 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00311Q8N616 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00311Q8N616 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00311Q8N616 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00311Q8N616 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00311Q8N616 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms