Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 SIGLEC16-201ENST00000599858 1437 ntBASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TTC9CQ8N5M4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 AC132008.2-207ENST00000454517 770 ntBASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 AL121772.3-201ENST00000610840 674 ntBASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 AC073592.4-201ENST00000623827 446 ntBASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 AP005117.1-201ENST00000584346 1413 ntBASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TTC9CQ8N5M4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 AC079776.2-201ENST00000641154 1609 ntBASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
TTC9CQ8N5M4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms