Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 CDCA4P2-201ENST00000441182 718 ntBASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 AC036111.1-201ENST00000533973 1582 ntBASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 KRT8P9-201ENST00000558927 1449 ntBASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 AC026271.3-201ENST00000571884 352 ntBASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.64■□□□□ 0.09
CROCCP3Q8IVE0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 HOXB1-202ENST00000577092 1414 ntBASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 AL365209.1-201ENST00000624418 6473 ntBASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 FAM207BP-201ENST00000447172 505 ntBASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 MIR3180-5-201ENST00000583743 153 ntBASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 AC011298.2-201ENST00000617989 482 ntBASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 AC067930.6-201ENST00000623257 4947 ntBASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 AC073347.1-201ENST00000421633 2643 ntBASIC15.63■□□□□ 0.09
CROCCP3Q8IVE0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.62■□□□□ 0.09
CROCCP3Q8IVE0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms