Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 AL139327.4-201ENST00000612362 153 ntBASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 AL162727.3-201ENST00000635661 2787 ntBASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.25■□□□□ 0.35
CRLF3Q8IUI8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 AL136038.3-201ENST00000561909 1096 ntBASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CRLF3Q8IUI8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 HBZP1-201ENST00000354915 429 ntBASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 AC092597.1-201ENST00000487352 616 ntBASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 AC116407.4-201ENST00000623319 1061 ntBASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.23■□□□□ 0.35
CRLF3Q8IUI8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms