Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
FOXR1Q6PIV2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18■□□□□ 0.47
FOXR1Q6PIV2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 AC004870.1-201ENST00000315132 882 ntBASIC18■□□□□ 0.47
FOXR1Q6PIV2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
FOXR1Q6PIV2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18■□□□□ 0.47
FOXR1Q6PIV2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18■□□□□ 0.47
FOXR1Q6PIV2 AC111152.3-201ENST00000569699 673 ntBASIC18■□□□□ 0.47
FOXR1Q6PIV2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18■□□□□ 0.47
FOXR1Q6PIV2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
FOXR1Q6PIV2 RNF216P1-203ENST00000404404 2427 ntBASIC18■□□□□ 0.47
FOXR1Q6PIV2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
FOXR1Q6PIV2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 AC016734.2-201ENST00000624325 1377 ntBASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 CYP2T1P-202ENST00000641596 2535 ntBASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.99■□□□□ 0.47
FOXR1Q6PIV2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 AL513523.2-202ENST00000427283 2040 ntBASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 MCCD1P1-208ENST00000445732 328 ntBASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 AP002414.4-201ENST00000589764 1148 ntBASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
FOXR1Q6PIV2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms