Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LYSMD4Q5XG99 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 GAPDHP21-201ENST00000450301 1010 ntBASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 ALG1L8P-201ENST00000533887 760 ntBASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 AL353732.1-201ENST00000569618 1459 ntBASIC16.77■□□□□ 0.28
LYSMD4Q5XG99 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD4Q5XG99 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.77■□□□□ 0.27
LYSMD4Q5XG99 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD4Q5XG99 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD4Q5XG99 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD4Q5XG99 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD4Q5XG99 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.77■□□□□ 0.27
LYSMD4Q5XG99 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LYSMD4Q5XG99 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 AC138028.4-201ENST00000564984 1845 ntBASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 HCG4-201ENST00000418983 998 ntBASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 AC097493.3-201ENST00000509725 367 ntBASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 AC008267.7-201ENST00000624570 1194 ntBASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LYSMD4Q5XG99 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms