Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 AC112698.1-201ENST00000510299 916 ntBASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ATPAF1Q5TC12 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 AC246785.2-201ENST00000432512 513 ntBASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 AC069148.1-201ENST00000608741 768 ntBASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 AL592071.1-201ENST00000611956 408 ntBASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 AC124864.1-201ENST00000623408 392 ntBASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATPAF1Q5TC12 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 ATP5G2P1-201ENST00000433580 426 ntBASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 DRAXINP1-201ENST00000437611 948 ntBASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 AC008741.2-201ENST00000612792 3115 ntBASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 AL603756.1-201ENST00000606511 2163 ntBASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms