Protein–RNA interactions for Protein: Q4ZHG4

FNDC1, Fibronectin type III domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1Q4ZHG4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 AC087641.1-201ENST00000557561 1021 ntBASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 MIR6080-201ENST00000617359 66 ntBASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 PCDHB18P-201ENST00000524813 2368 ntBASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FNDC1Q4ZHG4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 TUBB3P1-201ENST00000405796 1332 ntBASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 AC002472.2-201ENST00000442739 958 ntBASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 AL512356.2-201ENST00000546955 174 ntBASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 AL390754.1-201ENST00000619088 582 ntBASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 AC131009.4-201ENST00000624048 1740 ntBASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 TREML5P-201ENST00000421694 576 ntBASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 AC026150.2-201ENST00000564693 1156 ntBASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FNDC1Q4ZHG4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 TSPY16P-201ENST00000449843 468 ntBASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 LINC01225-203ENST00000563550 1244 ntBASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 AP000842.3-202ENST00000569238 1080 ntBASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC1Q4ZHG4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
FNDC1Q4ZHG4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC1Q4ZHG4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC1Q4ZHG4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC1Q4ZHG4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms