Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.49■□□□□ 0.87
PDS5AQ29RF7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 FAM86C2P-203ENST00000528684 1004 ntBASIC20.49■□□□□ 0.87
PDS5AQ29RF7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.49■□□□□ 0.87
PDS5AQ29RF7 AL009183.1-201ENST00000603760 355 ntBASIC20.49■□□□□ 0.87
PDS5AQ29RF7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 KRT18P28-201ENST00000453838 1332 ntBASIC20.48■□□□□ 0.87
PDS5AQ29RF7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 AC004461.1-201ENST00000412461 403 ntBASIC20.48■□□□□ 0.87
PDS5AQ29RF7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 MPDU1-223ENST00000582151 728 ntBASIC20.48■□□□□ 0.87
PDS5AQ29RF7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDS5AQ29RF7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 AC005332.8-201ENST00000622750 2735 ntBASIC20.47■□□□□ 0.87
PDS5AQ29RF7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 AL021920.2-201ENST00000624828 1351 ntBASIC20.47■□□□□ 0.87
PDS5AQ29RF7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 RN7SL589P-201ENST00000481268 310 ntBASIC20.47■□□□□ 0.87
PDS5AQ29RF7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 AC004835.2-201ENST00000603762 682 ntBASIC20.47■□□□□ 0.87
PDS5AQ29RF7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PDS5AQ29RF7 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.47■□□□□ 0.87
PDS5AQ29RF7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 AKAP8P1-201ENST00000434743 1349 ntBASIC20.46■□□□□ 0.87
PDS5AQ29RF7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 CROCCP2-202ENST00000412962 2773 ntBASIC20.46■□□□□ 0.87
PDS5AQ29RF7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 RNU1-129P-201ENST00000384064 167 ntBASIC20.46■□□□□ 0.87
PDS5AQ29RF7 METTL21AP1-201ENST00000438852 635 ntBASIC20.46■□□□□ 0.87
PDS5AQ29RF7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 AC087641.1-201ENST00000557561 1021 ntBASIC20.46■□□□□ 0.87
PDS5AQ29RF7 U1.21-201ENST00000580816 167 ntBASIC20.46■□□□□ 0.87
PDS5AQ29RF7 MIR4492-201ENST00000581627 80 ntBASIC20.46■□□□□ 0.87
PDS5AQ29RF7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 AC026120.1-201ENST00000611536 926 ntBASIC20.46■□□□□ 0.87
PDS5AQ29RF7 AL161645.1-201ENST00000622716 1255 ntBASIC20.46■□□□□ 0.87
PDS5AQ29RF7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.46■□□□□ 0.87
PDS5AQ29RF7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.45■□□□□ 0.87
PDS5AQ29RF7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDS5AQ29RF7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms