Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDH17Q12864 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH17Q12864 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CDH17Q12864 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH17Q12864 FOSL1P1-201ENST00000511041 816 ntBASIC17.4■□□□□ 0.38
CDH17Q12864 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.4■□□□□ 0.38
CDH17Q12864 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.4■□□□□ 0.38
CDH17Q12864 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH17Q12864 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH17Q12864 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDH17Q12864 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDH17Q12864 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDH17Q12864 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDH17Q12864 AP005117.1-201ENST00000584346 1413 ntBASIC17.39■□□□□ 0.38
CDH17Q12864 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH17Q12864 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH17Q12864 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDH17Q12864 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH17Q12864 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH17Q12864 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH17Q12864 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH17Q12864 FRMD8P1-201ENST00000440433 1524 ntBASIC17.39■□□□□ 0.37
CDH17Q12864 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDH17Q12864 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH17Q12864 AC132008.2-207ENST00000454517 770 ntBASIC17.39■□□□□ 0.37
CDH17Q12864 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH17Q12864 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH17Q12864 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CDH17Q12864 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH17Q12864 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH17Q12864 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH17Q12864 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH17Q12864 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH17Q12864 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH17Q12864 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH17Q12864 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
CDH17Q12864 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDH17Q12864 AC097637.2-201ENST00000624096 1997 ntBASIC17.39■□□□□ 0.37
CDH17Q12864 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH17Q12864 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH17Q12864 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
CDH17Q12864 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.38■□□□□ 0.37
CDH17Q12864 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CDH17Q12864 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH17Q12864 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.38■□□□□ 0.37
CDH17Q12864 HCG4P8-203ENST00000443049 980 ntBASIC17.38■□□□□ 0.37
CDH17Q12864 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.38■□□□□ 0.37
CDH17Q12864 MIR3652-201ENST00000579335 131 ntBASIC17.38■□□□□ 0.37
CDH17Q12864 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH17Q12864 AP001269.4-201ENST00000609611 512 ntBASIC17.38■□□□□ 0.37
CDH17Q12864 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CDH17Q12864 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH17Q12864 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH17Q12864 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.38■□□□□ 0.37
CDH17Q12864 AC004817.3-201ENST00000602957 2129 ntBASIC17.38■□□□□ 0.37
CDH17Q12864 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH17Q12864 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH17Q12864 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDH17Q12864 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH17Q12864 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH17Q12864 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH17Q12864 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDH17Q12864 AC106795.1-205ENST00000512851 1056 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms