Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SSBP1Q04837 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.58□□□□□ -0.08
SSBP1Q04837 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP1Q04837 AC107956.1-201ENST00000494359 873 ntBASIC14.58□□□□□ -0.08
SSBP1Q04837 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP1Q04837 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP1Q04837 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.58□□□□□ -0.08
SSBP1Q04837 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.58□□□□□ -0.08
SSBP1Q04837 KRT18P6-201ENST00000555540 1265 ntBASIC14.58□□□□□ -0.08
SSBP1Q04837 C2orf69P3-201ENST00000565542 1120 ntBASIC14.58□□□□□ -0.08
SSBP1Q04837 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP1Q04837 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.58□□□□□ -0.08
SSBP1Q04837 AC004263.2-201ENST00000617183 678 ntBASIC14.58□□□□□ -0.08
SSBP1Q04837 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.58□□□□□ -0.08
SSBP1Q04837 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SSBP1Q04837 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP1Q04837 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP1Q04837 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.58□□□□□ -0.08
SSBP1Q04837 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SSBP1Q04837 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.58□□□□□ -0.08
SSBP1Q04837 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SSBP1Q04837 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.57□□□□□ -0.08
SSBP1Q04837 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.57□□□□□ -0.08
SSBP1Q04837 GPR89P-201ENST00000407924 1495 ntBASIC14.57□□□□□ -0.08
SSBP1Q04837 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.57□□□□□ -0.08
SSBP1Q04837 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
SSBP1Q04837 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SSBP1Q04837 PKD1P5-201ENST00000532415 10291 ntBASIC14.57□□□□□ -0.08
SSBP1Q04837 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 UNC93B2-201ENST00000285383 730 ntBASIC14.57□□□□□ -0.08
SSBP1Q04837 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.57□□□□□ -0.08
SSBP1Q04837 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.57□□□□□ -0.08
SSBP1Q04837 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.57□□□□□ -0.08
SSBP1Q04837 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.57□□□□□ -0.08
SSBP1Q04837 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.57□□□□□ -0.08
SSBP1Q04837 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.57□□□□□ -0.08
SSBP1Q04837 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.57□□□□□ -0.08
SSBP1Q04837 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.57□□□□□ -0.08
SSBP1Q04837 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 AC092364.2-201ENST00000596710 2692 ntBASIC14.57□□□□□ -0.08
SSBP1Q04837 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSBP1Q04837 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.56□□□□□ -0.08
SSBP1Q04837 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 MTCL1P1-201ENST00000446207 792 ntBASIC14.56□□□□□ -0.08
SSBP1Q04837 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.56□□□□□ -0.08
SSBP1Q04837 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP1Q04837 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.56□□□□□ -0.08
SSBP1Q04837 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 AL359736.2-201ENST00000621992 437 ntBASIC14.56□□□□□ -0.08
SSBP1Q04837 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SSBP1Q04837 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms