Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RPS24-214ENST00000613865 538 ntTSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC10.49□□□□□ -0.73
HSPG2P98160 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 AC007389.4-201ENST00000454674 793 ntBASIC10.49□□□□□ -0.73
HSPG2P98160 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.49□□□□□ -0.73
HSPG2P98160 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 PAM16-204ENST00000571941 674 ntTSL 3 BASIC10.49□□□□□ -0.73
HSPG2P98160 RPS15-212ENST00000593052 629 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC10.49□□□□□ -0.73
HSPG2P98160 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 NSL1-201ENST00000366976 722 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 CSF2RBP1-201ENST00000447905 391 ntBASIC10.49□□□□□ -0.73
HSPG2P98160 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.49□□□□□ -0.73
HSPG2P98160 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC10.49□□□□□ -0.73
HSPG2P98160 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
HSPG2P98160 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC10.49□□□□□ -0.73
HSPG2P98160 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC10.48□□□□□ -0.73
HSPG2P98160 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC10.48□□□□□ -0.73
HSPG2P98160 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC10.48□□□□□ -0.73
HSPG2P98160 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC10.48□□□□□ -0.73
HSPG2P98160 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
HSPG2P98160 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC10.48□□□□□ -0.73
HSPG2P98160 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 BTNL10-201ENST00000595971 695 ntBASIC10.48□□□□□ -0.73
HSPG2P98160 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
HSPG2P98160 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
HSPG2P98160 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC10.48□□□□□ -0.73
HSPG2P98160 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC10.48□□□□□ -0.73
HSPG2P98160 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.48□□□□□ -0.73
HSPG2P98160 MTRF1LP2-201ENST00000506027 1122 ntBASIC10.48□□□□□ -0.73
HSPG2P98160 AC104989.1-201ENST00000519711 778 ntBASIC10.48□□□□□ -0.73
HSPG2P98160 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC10.48□□□□□ -0.73
HSPG2P98160 FOS-206ENST00000555347 1280 ntTSL 2 BASIC10.48□□□□□ -0.73
HSPG2P98160 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.48□□□□□ -0.73
HSPG2P98160 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
HSPG2P98160 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC10.48□□□□□ -0.73
HSPG2P98160 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC10.48□□□□□ -0.73
HSPG2P98160 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC10.48□□□□□ -0.73
HSPG2P98160 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
HSPG2P98160 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
HSPG2P98160 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 C2orf69P2-201ENST00000562032 1123 ntBASIC10.48□□□□□ -0.73
HSPG2P98160 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC10.48□□□□□ -0.73
HSPG2P98160 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
HSPG2P98160 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
HSPG2P98160 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC10.47□□□□□ -0.73
HSPG2P98160 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HSPG2P98160 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
HSPG2P98160 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC10.47□□□□□ -0.73
HSPG2P98160 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
HSPG2P98160 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
HSPG2P98160 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC10.47□□□□□ -0.73
HSPG2P98160 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC10.47□□□□□ -0.73
HSPG2P98160 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC10.47□□□□□ -0.73
HSPG2P98160 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HSPG2P98160 AC105021.1-202ENST00000570572 669 ntBASIC10.47□□□□□ -0.73
HSPG2P98160 AC005332.7-201ENST00000614046 2005 ntBASIC10.47□□□□□ -0.73
HSPG2P98160 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HSPG2P98160 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HSPG2P98160 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
HSPG2P98160 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
HSPG2P98160 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HSPG2P98160 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms