Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.46■□□□□ 0.71
CCNA1P78396 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCNA1P78396 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCNA1P78396 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCNA1P78396 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCNA1P78396 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCNA1P78396 HCG4-201ENST00000418983 998 ntBASIC19.46■□□□□ 0.71
CCNA1P78396 AC244107.1-201ENST00000442033 332 ntBASIC19.46■□□□□ 0.71
CCNA1P78396 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNA1P78396 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.46■□□□□ 0.71
CCNA1P78396 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNA1P78396 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.45■□□□□ 0.7
CCNA1P78396 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNA1P78396 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.45■□□□□ 0.7
CCNA1P78396 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.45■□□□□ 0.7
CCNA1P78396 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNA1P78396 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.45■□□□□ 0.7
CCNA1P78396 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNA1P78396 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCNA1P78396 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.45■□□□□ 0.7
CCNA1P78396 LINC01225-203ENST00000563550 1244 ntBASIC19.45■□□□□ 0.7
CCNA1P78396 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.45■□□□□ 0.7
CCNA1P78396 AC140878.1-201ENST00000565277 250 ntBASIC19.45■□□□□ 0.7
CCNA1P78396 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNA1P78396 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNA1P78396 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.45■□□□□ 0.7
CCNA1P78396 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCNA1P78396 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CCNA1P78396 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNA1P78396 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNA1P78396 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CCNA1P78396 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNA1P78396 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNA1P78396 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCNA1P78396 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNA1P78396 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNA1P78396 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNA1P78396 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNA1P78396 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.44■□□□□ 0.7
CCNA1P78396 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.44■□□□□ 0.7
CCNA1P78396 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.44■□□□□ 0.7
CCNA1P78396 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNA1P78396 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNA1P78396 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNA1P78396 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNA1P78396 AC026150.2-201ENST00000564693 1156 ntBASIC19.44■□□□□ 0.7
CCNA1P78396 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNA1P78396 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCNA1P78396 AC084121.4-201ENST00000641598 221 ntBASIC19.44■□□□□ 0.7
CCNA1P78396 AF228730.8-201ENST00000642140 221 ntBASIC19.44■□□□□ 0.7
CCNA1P78396 ABALON-201ENST00000629058 1903 ntBASIC19.44■□□□□ 0.7
CCNA1P78396 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNA1P78396 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCNA1P78396 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNA1P78396 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.44■□□□□ 0.7
CCNA1P78396 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNA1P78396 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNA1P78396 WASH6P-202ENST00000359512 1437 ntBASIC19.43■□□□□ 0.7
CCNA1P78396 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNA1P78396 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNA1P78396 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CCNA1P78396 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNA1P78396 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNA1P78396 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNA1P78396 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNA1P78396 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms