Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 AC108860.2-201ENST00000562760 2183 ntBASIC18.18■□□□□ 0.5
SNX16P57768 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SNX16P57768 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX16P57768 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX16P57768 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.18■□□□□ 0.5
SNX16P57768 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX16P57768 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX16P57768 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX16P57768 SART3-203ENST00000546611 1184 ntBASIC18.18■□□□□ 0.5
SNX16P57768 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX16P57768 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
SNX16P57768 AL121912.1-201ENST00000603683 238 ntBASIC18.18■□□□□ 0.5
SNX16P57768 AC064862.7-201ENST00000604520 867 ntBASIC18.18■□□□□ 0.5
SNX16P57768 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX16P57768 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX16P57768 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX16P57768 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX16P57768 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SNX16P57768 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SNX16P57768 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.17■□□□□ 0.5
SNX16P57768 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SNX16P57768 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SNX16P57768 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX16P57768 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SNX16P57768 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 RPS2P28-201ENST00000314255 741 ntBASIC18.17■□□□□ 0.5
SNX16P57768 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX16P57768 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SNX16P57768 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SNX16P57768 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX16P57768 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX16P57768 UNC93B7-201ENST00000509439 705 ntBASIC18.17■□□□□ 0.5
SNX16P57768 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.17■□□□□ 0.5
SNX16P57768 AC124947.2-201ENST00000547118 1133 ntBASIC18.17■□□□□ 0.5
SNX16P57768 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.17■□□□□ 0.5
SNX16P57768 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX16P57768 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX16P57768 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX16P57768 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX16P57768 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SNX16P57768 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX16P57768 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX16P57768 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX16P57768 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX16P57768 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 AC004817.3-201ENST00000602957 2129 ntBASIC18.16■□□□□ 0.5
SNX16P57768 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.16■□□□□ 0.5
SNX16P57768 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SNX16P57768 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.16■□□□□ 0.5
SNX16P57768 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.16■□□□□ 0.5
SNX16P57768 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX16P57768 RN7SL510P-201ENST00000581311 263 ntBASIC18.16■□□□□ 0.5
SNX16P57768 AC006557.2-201ENST00000592985 1240 ntBASIC18.16■□□□□ 0.5
SNX16P57768 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNX16P57768 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SNX16P57768 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX16P57768 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SNX16P57768 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX16P57768 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
SNX16P57768 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX16P57768 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms