Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE1AP54750 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
PDE1AP54750 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE1AP54750 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE1AP54750 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE1AP54750 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE1AP54750 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
PDE1AP54750 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE1AP54750 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.98■□□□□ 0.95
PDE1AP54750 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.98■□□□□ 0.95
PDE1AP54750 SCARNA2-201ENST00000458748 420 ntBASIC20.98■□□□□ 0.95
PDE1AP54750 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.98■□□□□ 0.95
PDE1AP54750 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.98■□□□□ 0.95
PDE1AP54750 AC004706.3-202ENST00000621574 984 ntBASIC20.98■□□□□ 0.95
PDE1AP54750 PCDHB17P-201ENST00000539533 2393 ntBASIC20.98■□□□□ 0.95
PDE1AP54750 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE1AP54750 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PDE1AP54750 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.98■□□□□ 0.95
PDE1AP54750 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PDE1AP54750 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.97■□□□□ 0.95
PDE1AP54750 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PDE1AP54750 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PDE1AP54750 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.97■□□□□ 0.95
PDE1AP54750 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.97■□□□□ 0.95
PDE1AP54750 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.97■□□□□ 0.95
PDE1AP54750 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.97■□□□□ 0.95
PDE1AP54750 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.97■□□□□ 0.95
PDE1AP54750 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.97■□□□□ 0.95
PDE1AP54750 AC139887.3-201ENST00000568585 713 ntBASIC20.97■□□□□ 0.95
PDE1AP54750 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.97■□□□□ 0.95
PDE1AP54750 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PDE1AP54750 TP73-AS1-207ENST00000624167 988 ntBASIC20.97■□□□□ 0.95
PDE1AP54750 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PDE1AP54750 AC084018.2-201ENST00000613093 2607 ntBASIC20.97■□□□□ 0.95
PDE1AP54750 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.97■□□□□ 0.95
PDE1AP54750 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 AC243591.1-201ENST00000452967 1364 ntBASIC20.97■□□□□ 0.95
PDE1AP54750 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE1AP54750 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.97■□□□□ 0.95
PDE1AP54750 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.96■□□□□ 0.95
PDE1AP54750 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.96■□□□□ 0.95
PDE1AP54750 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PDE1AP54750 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.96■□□□□ 0.95
PDE1AP54750 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PDE1AP54750 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PDE1AP54750 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PDE1AP54750 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.96■□□□□ 0.95
PDE1AP54750 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.96■□□□□ 0.95
PDE1AP54750 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.96■□□□□ 0.95
PDE1AP54750 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.96■□□□□ 0.95
PDE1AP54750 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.96■□□□□ 0.95
PDE1AP54750 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PDE1AP54750 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.96■□□□□ 0.95
PDE1AP54750 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.96■□□□□ 0.95
PDE1AP54750 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PDE1AP54750 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.96■□□□□ 0.95
PDE1AP54750 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.96■□□□□ 0.95
PDE1AP54750 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE1AP54750 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.95
PDE1AP54750 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
PDE1AP54750 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
PDE1AP54750 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
PDE1AP54750 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE1AP54750 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PDE1AP54750 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.95■□□□□ 0.94
PDE1AP54750 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE1AP54750 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE1AP54750 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE1AP54750 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms