Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC34P49427 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC34P49427 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC34P49427 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDC34P49427 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CDC34P49427 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDC34P49427 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.65□□□□□ -0.22
CDC34P49427 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 KRT8P9-201ENST00000558927 1449 ntBASIC13.65□□□□□ -0.22
CDC34P49427 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CDC34P49427 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CDC34P49427 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CDC34P49427 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 LINC00554-201ENST00000564841 3011 ntBASIC13.65□□□□□ -0.22
CDC34P49427 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.65□□□□□ -0.22
CDC34P49427 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CDC34P49427 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.65□□□□□ -0.22
CDC34P49427 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.65□□□□□ -0.22
CDC34P49427 NUDT16P1-203ENST00000513809 620 ntBASIC13.65□□□□□ -0.22
CDC34P49427 AC124947.2-201ENST00000547118 1133 ntBASIC13.65□□□□□ -0.22
CDC34P49427 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.65□□□□□ -0.22
CDC34P49427 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.65□□□□□ -0.22
CDC34P49427 AL353719.1-201ENST00000566847 864 ntBASIC13.65□□□□□ -0.22
CDC34P49427 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.65□□□□□ -0.22
CDC34P49427 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDC34P49427 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.65□□□□□ -0.22
CDC34P49427 AC073648.6-201ENST00000641589 218 ntBASIC13.65□□□□□ -0.22
CDC34P49427 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.65□□□□□ -0.22
CDC34P49427 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.65□□□□□ -0.22
CDC34P49427 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDC34P49427 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CDC34P49427 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.65□□□□□ -0.22
CDC34P49427 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDC34P49427 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CDC34P49427 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CDC34P49427 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CDC34P49427 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC34P49427 AL136379.1-201ENST00000623471 2642 ntBASIC13.64□□□□□ -0.23
CDC34P49427 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CDC34P49427 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.64□□□□□ -0.23
CDC34P49427 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC34P49427 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC34P49427 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC34P49427 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 SLC25A1P3-201ENST00000395415 828 ntBASIC13.64□□□□□ -0.23
CDC34P49427 AL355802.2-201ENST00000402069 882 ntBASIC13.64□□□□□ -0.23
CDC34P49427 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 SLC25A1P2-201ENST00000430693 912 ntBASIC13.64□□□□□ -0.23
CDC34P49427 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC34P49427 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.64□□□□□ -0.23
CDC34P49427 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.64□□□□□ -0.23
CDC34P49427 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.64□□□□□ -0.23
CDC34P49427 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDC34P49427 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms