Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC1A1P43005 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC1A1P43005 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
SLC1A1P43005 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC1A1P43005 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SLC1A1P43005 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLC1A1P43005 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC1A1P43005 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLC1A1P43005 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC1A1P43005 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC1A1P43005 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
SLC1A1P43005 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.03■□□□□ 0.48
SLC1A1P43005 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 AP002490.2-201ENST00000524791 560 ntBASIC18.03■□□□□ 0.48
SLC1A1P43005 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 AC092329.2-201ENST00000598402 547 ntBASIC18.03■□□□□ 0.48
SLC1A1P43005 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC1A1P43005 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC1A1P43005 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SLC1A1P43005 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SLC1A1P43005 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SLC1A1P43005 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SLC1A1P43005 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC1A1P43005 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC1A1P43005 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC1A1P43005 RNF216P1-203ENST00000404404 2427 ntBASIC18.02■□□□□ 0.48
SLC1A1P43005 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC1A1P43005 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SLC1A1P43005 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC1A1P43005 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SLC1A1P43005 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SLC1A1P43005 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
SLC1A1P43005 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC1A1P43005 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC1A1P43005 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC1A1P43005 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC1A1P43005 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC1A1P43005 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC1A1P43005 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SLC1A1P43005 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC1A1P43005 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC1A1P43005 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.02■□□□□ 0.48
SLC1A1P43005 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC1A1P43005 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC1A1P43005 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.02■□□□□ 0.48
SLC1A1P43005 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC1A1P43005 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SLC1A1P43005 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
SLC1A1P43005 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SLC1A1P43005 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.02■□□□□ 0.47
SLC1A1P43005 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC1A1P43005 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SLC1A1P43005 TUBB8P12-201ENST00000308911 1335 ntBASIC18.01■□□□□ 0.47
SLC1A1P43005 TUBB7P-202ENST00000428444 1305 ntBASIC18.01■□□□□ 0.47
SLC1A1P43005 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC1A1P43005 TUBB8P7-204ENST00000567960 1332 ntBASIC18.01■□□□□ 0.47
SLC1A1P43005 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SLC1A1P43005 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A1P43005 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A1P43005 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A1P43005 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC1A1P43005 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC1A1P43005 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A1P43005 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC1A1P43005 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC1A1P43005 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
SLC1A1P43005 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC1A1P43005 SPDYE21P-201ENST00000413323 827 ntBASIC18.01■□□□□ 0.47
SLC1A1P43005 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A1P43005 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A1P43005 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC1A1P43005 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A1P43005 AC074051.2-201ENST00000565115 352 ntBASIC18.01■□□□□ 0.47
SLC1A1P43005 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.01■□□□□ 0.47
SLC1A1P43005 MIR3180-1-201ENST00000580374 94 ntBASIC18.01■□□□□ 0.47
SLC1A1P43005 MIR3180-3-201ENST00000584616 94 ntBASIC18.01■□□□□ 0.47
SLC1A1P43005 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.01■□□□□ 0.47
SLC1A1P43005 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
SLC1A1P43005 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC1A1P43005 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms