Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.58■□□□□ 0.56
TNFSF9P41273 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF9P41273 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF9P41273 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
TNFSF9P41273 LINC02012-201ENST00000608206 1725 ntBASIC18.57■□□□□ 0.56
TNFSF9P41273 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TNFSF9P41273 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TNFSF9P41273 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.57■□□□□ 0.56
TNFSF9P41273 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 PRSS29P-201ENST00000440800 595 ntBASIC18.57■□□□□ 0.56
TNFSF9P41273 PGAM5P1-201ENST00000518923 814 ntBASIC18.57■□□□□ 0.56
TNFSF9P41273 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFSF9P41273 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.57■□□□□ 0.56
TNFSF9P41273 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.57■□□□□ 0.56
TNFSF9P41273 AC010654.1-201ENST00000615722 808 ntBASIC18.57■□□□□ 0.56
TNFSF9P41273 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.57■□□□□ 0.56
TNFSF9P41273 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.57■□□□□ 0.56
TNFSF9P41273 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 FRMD8P1-201ENST00000440433 1524 ntBASIC18.57■□□□□ 0.56
TNFSF9P41273 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TNFSF9P41273 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.57■□□□□ 0.56
TNFSF9P41273 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TNFSF9P41273 AC012313.1-201ENST00000593393 3059 ntBASIC18.57■□□□□ 0.56
TNFSF9P41273 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFSF9P41273 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TNFSF9P41273 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFSF9P41273 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TNFSF9P41273 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 AC002310.6-201ENST00000624451 1377 ntBASIC18.56■□□□□ 0.56
TNFSF9P41273 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TNFSF9P41273 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TNFSF9P41273 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TNFSF9P41273 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
TNFSF9P41273 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.56■□□□□ 0.56
TNFSF9P41273 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.56■□□□□ 0.56
TNFSF9P41273 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TNFSF9P41273 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.56■□□□□ 0.56
TNFSF9P41273 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.56■□□□□ 0.56
TNFSF9P41273 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.56■□□□□ 0.56
TNFSF9P41273 AC018845.2-201ENST00000568326 409 ntBASIC18.56■□□□□ 0.56
TNFSF9P41273 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.56■□□□□ 0.56
TNFSF9P41273 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TNFSF9P41273 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TNFSF9P41273 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TNFSF9P41273 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFSF9P41273 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF9P41273 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TNFSF9P41273 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFSF9P41273 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF9P41273 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TNFSF9P41273 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.55■□□□□ 0.56
TNFSF9P41273 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFSF9P41273 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF9P41273 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF9P41273 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF9P41273 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF9P41273 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TNFSF9P41273 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.55■□□□□ 0.56
TNFSF9P41273 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.55■□□□□ 0.56
TNFSF9P41273 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.55■□□□□ 0.56
TNFSF9P41273 AL591424.1-201ENST00000442569 1213 ntBASIC18.55■□□□□ 0.56
TNFSF9P41273 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.55■□□□□ 0.56
TNFSF9P41273 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFSF9P41273 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TNFSF9P41273 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF9P41273 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFSF9P41273 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF9P41273 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFSF9P41273 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms