Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCNFP41002 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.35■□□□□ 0.37
CCNFP41002 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNFP41002 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCNFP41002 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNFP41002 AC233702.3-201ENST00000578656 1387 ntBASIC17.35■□□□□ 0.37
CCNFP41002 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.35■□□□□ 0.37
CCNFP41002 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNFP41002 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNFP41002 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCNFP41002 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.35■□□□□ 0.37
CCNFP41002 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCNFP41002 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CCNFP41002 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCNFP41002 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCNFP41002 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCNFP41002 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCNFP41002 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 AC125634.1-201ENST00000438758 1403 ntBASIC17.34■□□□□ 0.37
CCNFP41002 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.34■□□□□ 0.37
CCNFP41002 LINC00265-3P-201ENST00000447588 903 ntBASIC17.34■□□□□ 0.37
CCNFP41002 TOB2P1-201ENST00000469761 992 ntBASIC17.34■□□□□ 0.37
CCNFP41002 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.34■□□□□ 0.37
CCNFP41002 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.34■□□□□ 0.37
CCNFP41002 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.34■□□□□ 0.37
CCNFP41002 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCNFP41002 MIR3180-1-201ENST00000580374 94 ntBASIC17.34■□□□□ 0.37
CCNFP41002 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.34■□□□□ 0.37
CCNFP41002 MIR3180-3-201ENST00000584616 94 ntBASIC17.34■□□□□ 0.37
CCNFP41002 AC092329.2-201ENST00000598402 547 ntBASIC17.34■□□□□ 0.37
CCNFP41002 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCNFP41002 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.34■□□□□ 0.37
CCNFP41002 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.34■□□□□ 0.37
CCNFP41002 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCNFP41002 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCNFP41002 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCNFP41002 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCNFP41002 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.33■□□□□ 0.37
CCNFP41002 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CCNFP41002 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCNFP41002 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.33■□□□□ 0.37
CCNFP41002 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CCNFP41002 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CCNFP41002 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.33■□□□□ 0.36
CCNFP41002 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNFP41002 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNFP41002 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNFP41002 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.33■□□□□ 0.36
CCNFP41002 MYCLP1-201ENST00000372451 1075 ntBASIC17.33■□□□□ 0.36
CCNFP41002 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CCNFP41002 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNFP41002 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.33■□□□□ 0.36
CCNFP41002 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNFP41002 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.33■□□□□ 0.36
CCNFP41002 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.33■□□□□ 0.36
CCNFP41002 AL138831.2-201ENST00000606564 490 ntBASIC17.33■□□□□ 0.36
CCNFP41002 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.33■□□□□ 0.36
CCNFP41002 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CCNFP41002 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.33■□□□□ 0.36
CCNFP41002 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCNFP41002 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms