Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC024243.1-201ENST00000609234 778 ntBASIC19.62■□□□□ 0.73
CLCN1P35523 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCN1P35523 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN1P35523 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN1P35523 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN1P35523 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCN1P35523 AC006058.4-201ENST00000624016 1670 ntBASIC19.62■□□□□ 0.73
CLCN1P35523 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN1P35523 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN1P35523 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 AC104581.4-201ENST00000623126 3052 ntBASIC19.61■□□□□ 0.73
CLCN1P35523 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN1P35523 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN1P35523 POLL-206ENST00000370172 2308 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN1P35523 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.61■□□□□ 0.73
CLCN1P35523 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.61■□□□□ 0.73
CLCN1P35523 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN1P35523 AL512604.3-201ENST00000569583 964 ntBASIC19.61■□□□□ 0.73
CLCN1P35523 MIR3180-4-201ENST00000582223 153 ntBASIC19.61■□□□□ 0.73
CLCN1P35523 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 AC010240.3-201ENST00000607688 395 ntBASIC19.61■□□□□ 0.73
CLCN1P35523 AL138966.2-201ENST00000621997 464 ntBASIC19.61■□□□□ 0.73
CLCN1P35523 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CLCN1P35523 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCN1P35523 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLCN1P35523 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.61■□□□□ 0.73
CLCN1P35523 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CLCN1P35523 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN1P35523 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN1P35523 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
CLCN1P35523 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN1P35523 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN1P35523 ECEL1P3-201ENST00000427961 737 ntBASIC19.6■□□□□ 0.73
CLCN1P35523 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CLCN1P35523 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.6■□□□□ 0.73
CLCN1P35523 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.6■□□□□ 0.73
CLCN1P35523 NEK4P2-201ENST00000580004 1012 ntBASIC19.6■□□□□ 0.73
CLCN1P35523 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCN1P35523 AC012306.2-201ENST00000609350 630 ntBASIC19.6■□□□□ 0.73
CLCN1P35523 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLCN1P35523 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLCN1P35523 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.6■□□□□ 0.73
CLCN1P35523 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCN1P35523 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN1P35523 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLCN1P35523 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN1P35523 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN1P35523 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCN1P35523 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.59■□□□□ 0.73
CLCN1P35523 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms