Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
PTPN7P35236 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN7P35236 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN7P35236 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN7P35236 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN7P35236 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PTPN7P35236 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN7P35236 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN7P35236 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN7P35236 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN7P35236 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.8■□□□□ 0.44
PTPN7P35236 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.8■□□□□ 0.44
PTPN7P35236 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
PTPN7P35236 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.8■□□□□ 0.44
PTPN7P35236 AP002490.2-201ENST00000524791 560 ntBASIC17.8■□□□□ 0.44
PTPN7P35236 AC074051.2-201ENST00000565115 352 ntBASIC17.8■□□□□ 0.44
PTPN7P35236 AC012615.1-201ENST00000565797 1299 ntBASIC17.8■□□□□ 0.44
PTPN7P35236 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.8■□□□□ 0.44
PTPN7P35236 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN7P35236 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PTPN7P35236 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN7P35236 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PTPN7P35236 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PTPN7P35236 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN7P35236 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN7P35236 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN7P35236 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
PTPN7P35236 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPN7P35236 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPN7P35236 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
PTPN7P35236 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN7P35236 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPN7P35236 ABCD1P5-201ENST00000445663 754 ntBASIC17.79■□□□□ 0.44
PTPN7P35236 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.79■□□□□ 0.44
PTPN7P35236 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN7P35236 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.79■□□□□ 0.44
PTPN7P35236 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.79■□□□□ 0.44
PTPN7P35236 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN7P35236 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN7P35236 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PTPN7P35236 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTPN7P35236 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN7P35236 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 AC004817.3-201ENST00000602957 2129 ntBASIC17.78■□□□□ 0.44
PTPN7P35236 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN7P35236 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN7P35236 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PTPN7P35236 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN7P35236 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PTPN7P35236 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTPN7P35236 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTPN7P35236 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PTPN7P35236 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.78■□□□□ 0.44
PTPN7P35236 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN7P35236 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN7P35236 AC104819.1-201ENST00000504587 486 ntBASIC17.78■□□□□ 0.44
PTPN7P35236 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.78■□□□□ 0.44
PTPN7P35236 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN7P35236 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN7P35236 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.78■□□□□ 0.44
PTPN7P35236 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms