Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CPS1P31327 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CPS1P31327 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPS1P31327 KRT8P44-201ENST00000441609 1350 ntBASIC23.98■■□□□ 1.43
CPS1P31327 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPS1P31327 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPS1P31327 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPS1P31327 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC23.98■■□□□ 1.43
CPS1P31327 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CPS1P31327 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC23.98■■□□□ 1.43
CPS1P31327 TTTY23B-201ENST00000442790 549 ntBASIC23.98■■□□□ 1.43
CPS1P31327 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CPS1P31327 AC005412.3-201ENST00000580309 715 ntBASIC23.98■■□□□ 1.43
CPS1P31327 AC018529.1-201ENST00000613063 361 ntBASIC23.98■■□□□ 1.43
CPS1P31327 TEX28P1-201ENST00000613479 1221 ntBASIC23.98■■□□□ 1.43
CPS1P31327 TEX28P2-201ENST00000617764 1221 ntBASIC23.98■■□□□ 1.43
CPS1P31327 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CPS1P31327 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPS1P31327 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPS1P31327 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CPS1P31327 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CPS1P31327 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPS1P31327 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.97■■□□□ 1.43
CPS1P31327 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.97■■□□□ 1.43
CPS1P31327 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CPS1P31327 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPS1P31327 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
CPS1P31327 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
CPS1P31327 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CPS1P31327 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPS1P31327 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.97■■□□□ 1.43
CPS1P31327 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
CPS1P31327 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CPS1P31327 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPS1P31327 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPS1P31327 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC23.97■■□□□ 1.43
CPS1P31327 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC23.97■■□□□ 1.43
CPS1P31327 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC23.97■■□□□ 1.43
CPS1P31327 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC23.97■■□□□ 1.43
CPS1P31327 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC23.97■■□□□ 1.43
CPS1P31327 AL512343.1-201ENST00000605837 169 ntBASIC23.97■■□□□ 1.43
CPS1P31327 LINC01451-201ENST00000623792 534 ntBASIC23.97■■□□□ 1.43
CPS1P31327 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC23.97■■□□□ 1.43
CPS1P31327 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPS1P31327 TNXA-203ENST00000507684 2038 ntBASIC23.97■■□□□ 1.43
CPS1P31327 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CPS1P31327 AC087499.5-201ENST00000452760 1342 ntBASIC23.97■■□□□ 1.43
CPS1P31327 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC23.97■■□□□ 1.43
CPS1P31327 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPS1P31327 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CPS1P31327 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPS1P31327 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CPS1P31327 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC23.96■■□□□ 1.43
CPS1P31327 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPS1P31327 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC23.96■■□□□ 1.43
CPS1P31327 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC23.96■■□□□ 1.43
CPS1P31327 RN7SL837P-201ENST00000463010 287 ntBASIC23.96■■□□□ 1.43
CPS1P31327 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC23.96■■□□□ 1.43
CPS1P31327 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPS1P31327 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC23.96■■□□□ 1.43
CPS1P31327 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC23.96■■□□□ 1.43
CPS1P31327 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPS1P31327 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC23.96■■□□□ 1.43
CPS1P31327 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC23.96■■□□□ 1.43
CPS1P31327 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPS1P31327 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPS1P31327 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CPS1P31327 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPS1P31327 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC23.96■■□□□ 1.43
CPS1P31327 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.96■■□□□ 1.43
CPS1P31327 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPS1P31327 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CPS1P31327 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CPS1P31327 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
CPS1P31327 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
CPS1P31327 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC23.95■■□□□ 1.43
CPS1P31327 GLI4-203ENST00000517468 963 ntTSL 5 BASIC23.95■■□□□ 1.43
CPS1P31327 SNX29P1-201ENST00000548357 1007 ntBASIC23.95■■□□□ 1.43
CPS1P31327 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC23.95■■□□□ 1.43
CPS1P31327 RARRES2P9-201ENST00000565168 469 ntBASIC23.95■■□□□ 1.43
CPS1P31327 AC099568.2-201ENST00000609194 695 ntBASIC23.95■■□□□ 1.43
CPS1P31327 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CPS1P31327 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC23.95■■□□□ 1.42
CPS1P31327 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPS1P31327 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CPS1P31327 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC23.95■■□□□ 1.42
CPS1P31327 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
CPS1P31327 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CPS1P31327 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPS1P31327 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CPS1P31327 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CPS1P31327 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC23.95■■□□□ 1.42
CPS1P31327 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPS1P31327 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPS1P31327 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CPS1P31327 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.95■■□□□ 1.42
CPS1P31327 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPS1P31327 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
CPS1P31327 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC23.94■■□□□ 1.42
CPS1P31327 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms