Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.83□□□□□ -0.04
CD40P25942 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.83□□□□□ -0.04
CD40P25942 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CD40P25942 AC010507.1-201ENST00000633895 436 ntBASIC14.83□□□□□ -0.04
CD40P25942 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CD40P25942 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.83□□□□□ -0.04
CD40P25942 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.83□□□□□ -0.04
CD40P25942 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD40P25942 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.83□□□□□ -0.04
CD40P25942 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40P25942 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.82□□□□□ -0.04
CD40P25942 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40P25942 AC018470.1-201ENST00000624790 3129 ntBASIC14.82□□□□□ -0.04
CD40P25942 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40P25942 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 RPSAP43-201ENST00000402237 625 ntBASIC14.82□□□□□ -0.04
CD40P25942 MCCD1P2-201ENST00000423228 335 ntBASIC14.82□□□□□ -0.04
CD40P25942 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CD40P25942 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.82□□□□□ -0.04
CD40P25942 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.82□□□□□ -0.04
CD40P25942 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.82□□□□□ -0.04
CD40P25942 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.82□□□□□ -0.04
CD40P25942 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD40P25942 AC092865.6-201ENST00000642101 219 ntBASIC14.82□□□□□ -0.04
CD40P25942 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CD40P25942 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40P25942 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.82□□□□□ -0.04
CD40P25942 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.82□□□□□ -0.04
CD40P25942 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD40P25942 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD40P25942 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD40P25942 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CD40P25942 AC016396.2-201ENST00000562575 1417 ntBASIC14.82□□□□□ -0.04
CD40P25942 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD40P25942 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD40P25942 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD40P25942 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.81□□□□□ -0.04
CD40P25942 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CD40P25942 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.81□□□□□ -0.04
CD40P25942 AC087163.2-201ENST00000457299 853 ntBASIC14.81□□□□□ -0.04
CD40P25942 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.81□□□□□ -0.04
CD40P25942 CXCL1P1-201ENST00000502804 216 ntBASIC14.81□□□□□ -0.04
CD40P25942 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.81□□□□□ -0.04
CD40P25942 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CD40P25942 AC004877.2-201ENST00000623941 599 ntBASIC14.81□□□□□ -0.04
CD40P25942 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CD40P25942 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.81□□□□□ -0.04
CD40P25942 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.81□□□□□ -0.04
CD40P25942 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 AL138688.1-201ENST00000624851 1594 ntBASIC14.81□□□□□ -0.04
CD40P25942 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD40P25942 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD40P25942 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD40P25942 NOC2LP2-201ENST00000407594 1944 ntBASIC14.8□□□□□ -0.04
CD40P25942 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD40P25942 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD40P25942 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CD40P25942 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms