Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TNFSF4P23510 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFSF4P23510 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TNFSF4P23510 AC097637.2-201ENST00000624096 1997 ntBASIC14.76□□□□□ -0.05
TNFSF4P23510 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFSF4P23510 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFSF4P23510 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFSF4P23510 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFSF4P23510 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
TNFSF4P23510 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TNFSF4P23510 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.75□□□□□ -0.05
TNFSF4P23510 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.75□□□□□ -0.05
TNFSF4P23510 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFSF4P23510 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TNFSF4P23510 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.75□□□□□ -0.05
TNFSF4P23510 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TNFSF4P23510 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TNFSF4P23510 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.75□□□□□ -0.05
TNFSF4P23510 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.75□□□□□ -0.05
TNFSF4P23510 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TNFSF4P23510 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TNFSF4P23510 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
TNFSF4P23510 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
TNFSF4P23510 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.75□□□□□ -0.05
TNFSF4P23510 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.75□□□□□ -0.05
TNFSF4P23510 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.75□□□□□ -0.05
TNFSF4P23510 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TNFSF4P23510 AP001005.1-201ENST00000571755 1248 ntBASIC14.75□□□□□ -0.05
TNFSF4P23510 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.75□□□□□ -0.05
TNFSF4P23510 AC104692.2-201ENST00000603054 253 ntBASIC14.75□□□□□ -0.05
TNFSF4P23510 TP73-AS1-207ENST00000624167 988 ntBASIC14.75□□□□□ -0.05
TNFSF4P23510 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
TNFSF4P23510 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
TNFSF4P23510 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TNFSF4P23510 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.75□□□□□ -0.05
TNFSF4P23510 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TNFSF4P23510 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TNFSF4P23510 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 AC148477.5-201ENST00000625164 1645 ntBASIC14.74□□□□□ -0.05
TNFSF4P23510 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFSF4P23510 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.74□□□□□ -0.05
TNFSF4P23510 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TNFSF4P23510 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
TNFSF4P23510 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TNFSF4P23510 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.74□□□□□ -0.05
TNFSF4P23510 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.74□□□□□ -0.05
TNFSF4P23510 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.74□□□□□ -0.05
TNFSF4P23510 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.74□□□□□ -0.05
TNFSF4P23510 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TNFSF4P23510 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFSF4P23510 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TNFSF4P23510 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFSF4P23510 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.74□□□□□ -0.05
TNFSF4P23510 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TNFSF4P23510 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms