Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.07■□□□□ 0.16
NR4A1P22736 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 AC005052.1-201ENST00000625181 2492 ntBASIC16.07■□□□□ 0.16
NR4A1P22736 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.07■□□□□ 0.16
NR4A1P22736 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.07■□□□□ 0.16
NR4A1P22736 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.07■□□□□ 0.16
NR4A1P22736 FAM8A6P-201ENST00000407496 1135 ntBASIC16.07■□□□□ 0.16
NR4A1P22736 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.07■□□□□ 0.16
NR4A1P22736 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.07■□□□□ 0.16
NR4A1P22736 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.07■□□□□ 0.16
NR4A1P22736 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.07■□□□□ 0.16
NR4A1P22736 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.07■□□□□ 0.16
NR4A1P22736 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.07■□□□□ 0.16
NR4A1P22736 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.07■□□□□ 0.16
NR4A1P22736 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
NR4A1P22736 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
NR4A1P22736 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 HOXB1-202ENST00000577092 1414 ntBASIC16.07■□□□□ 0.16
NR4A1P22736 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.07■□□□□ 0.16
NR4A1P22736 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.07■□□□□ 0.16
NR4A1P22736 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NR4A1P22736 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NR4A1P22736 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.07■□□□□ 0.16
NR4A1P22736 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NR4A1P22736 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.06■□□□□ 0.16
NR4A1P22736 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.06■□□□□ 0.16
NR4A1P22736 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NR4A1P22736 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.06■□□□□ 0.16
NR4A1P22736 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
NR4A1P22736 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.06■□□□□ 0.16
NR4A1P22736 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.06■□□□□ 0.16
NR4A1P22736 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.06■□□□□ 0.16
NR4A1P22736 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.06■□□□□ 0.16
NR4A1P22736 KRT8P50-201ENST00000562022 1438 ntBASIC16.06■□□□□ 0.16
NR4A1P22736 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NR4A1P22736 AP000593.1-201ENST00000393668 712 ntBASIC16.06■□□□□ 0.16
NR4A1P22736 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.06■□□□□ 0.16
NR4A1P22736 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 KRT18P23-201ENST00000435622 1283 ntBASIC16.06■□□□□ 0.16
NR4A1P22736 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.06■□□□□ 0.16
NR4A1P22736 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.06■□□□□ 0.16
NR4A1P22736 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.06■□□□□ 0.16
NR4A1P22736 AC024243.1-201ENST00000609234 778 ntBASIC16.06■□□□□ 0.16
NR4A1P22736 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.06■□□□□ 0.16
NR4A1P22736 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NR4A1P22736 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.06■□□□□ 0.16
NR4A1P22736 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.06■□□□□ 0.16
NR4A1P22736 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
NR4A1P22736 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.06■□□□□ 0.16
NR4A1P22736 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NR4A1P22736 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.06■□□□□ 0.16
NR4A1P22736 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
NR4A1P22736 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NR4A1P22736 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NR4A1P22736 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NR4A1P22736 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.05■□□□□ 0.16
NR4A1P22736 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NR4A1P22736 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR4A1P22736 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR4A1P22736 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.05■□□□□ 0.16
NR4A1P22736 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR4A1P22736 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR4A1P22736 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR4A1P22736 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.05■□□□□ 0.16
NR4A1P22736 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR4A1P22736 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NR4A1P22736 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms