Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB4AP20338 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.25□□□□□ -0.29
RAB4AP20338 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB4AP20338 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
RAB4AP20338 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.25□□□□□ -0.29
RAB4AP20338 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB4AP20338 SOX15-203ENST00000570788 1093 ntBASIC13.25□□□□□ -0.29
RAB4AP20338 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB4AP20338 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.25□□□□□ -0.29
RAB4AP20338 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RAB4AP20338 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB4AP20338 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC13.25□□□□□ -0.29
RAB4AP20338 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB4AP20338 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RAB4AP20338 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.25□□□□□ -0.29
RAB4AP20338 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB4AP20338 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RAB4AP20338 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB4AP20338 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB4AP20338 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB4AP20338 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB4AP20338 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB4AP20338 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
RAB4AP20338 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 AC006449.5-201ENST00000610658 2098 ntBASIC13.24□□□□□ -0.29
RAB4AP20338 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RAB4AP20338 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB4AP20338 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB4AP20338 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
RAB4AP20338 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RAB4AP20338 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.24□□□□□ -0.29
RAB4AP20338 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB4AP20338 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.24□□□□□ -0.29
RAB4AP20338 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.24□□□□□ -0.29
RAB4AP20338 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RAB4AP20338 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RAB4AP20338 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 AL109659.2-201ENST00000606809 1674 ntBASIC13.24□□□□□ -0.29
RAB4AP20338 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.24□□□□□ -0.29
RAB4AP20338 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB4AP20338 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.24□□□□□ -0.29
RAB4AP20338 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RAB4AP20338 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RAB4AP20338 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB4AP20338 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB4AP20338 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RAB4AP20338 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
RAB4AP20338 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.23□□□□□ -0.29
RAB4AP20338 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.23□□□□□ -0.29
RAB4AP20338 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.23□□□□□ -0.29
RAB4AP20338 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 AL355312.1-201ENST00000407115 2176 ntBASIC13.23□□□□□ -0.29
RAB4AP20338 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RAB4AP20338 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
RAB4AP20338 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms