Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.52■□□□□ 0.4
NFKB1P19838 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.52■□□□□ 0.4
NFKB1P19838 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.52■□□□□ 0.4
NFKB1P19838 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.52■□□□□ 0.4
NFKB1P19838 AL355877.3-201ENST00000622820 899 ntBASIC17.52■□□□□ 0.4
NFKB1P19838 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NFKB1P19838 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NFKB1P19838 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.52■□□□□ 0.4
NFKB1P19838 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
NFKB1P19838 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.52■□□□□ 0.39
NFKB1P19838 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
NFKB1P19838 NKILA-202ENST00000614771 2598 ntBASIC17.52■□□□□ 0.39
NFKB1P19838 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.52■□□□□ 0.39
NFKB1P19838 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.52■□□□□ 0.39
NFKB1P19838 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NFKB1P19838 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NFKB1P19838 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.52■□□□□ 0.39
NFKB1P19838 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NFKB1P19838 AC005915.1-201ENST00000624912 2018 ntBASIC17.52■□□□□ 0.39
NFKB1P19838 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NFKB1P19838 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NFKB1P19838 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
NFKB1P19838 GPR89P-201ENST00000407924 1495 ntBASIC17.51■□□□□ 0.39
NFKB1P19838 AL356309.3-201ENST00000624132 1934 ntBASIC17.51■□□□□ 0.39
NFKB1P19838 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
NFKB1P19838 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.51■□□□□ 0.39
NFKB1P19838 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.51■□□□□ 0.39
NFKB1P19838 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.51■□□□□ 0.39
NFKB1P19838 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.51■□□□□ 0.39
NFKB1P19838 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.51■□□□□ 0.39
NFKB1P19838 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NFKB1P19838 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.51■□□□□ 0.39
NFKB1P19838 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 AC124947.2-201ENST00000547118 1133 ntBASIC17.51■□□□□ 0.39
NFKB1P19838 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.51■□□□□ 0.39
NFKB1P19838 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.51■□□□□ 0.39
NFKB1P19838 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NFKB1P19838 AC008608.2-201ENST00000606089 416 ntBASIC17.51■□□□□ 0.39
NFKB1P19838 REXO1L6P-202ENST00000619970 1078 ntBASIC17.51■□□□□ 0.39
NFKB1P19838 AL139288.1-201ENST00000623748 933 ntBASIC17.51■□□□□ 0.39
NFKB1P19838 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.51■□□□□ 0.39
NFKB1P19838 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.51■□□□□ 0.39
NFKB1P19838 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.51■□□□□ 0.39
NFKB1P19838 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.51■□□□□ 0.39
NFKB1P19838 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NFKB1P19838 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NFKB1P19838 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 AC011676.5-201ENST00000624864 2660 ntBASIC17.5■□□□□ 0.39
NFKB1P19838 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 AC106886.4-201ENST00000623557 2502 ntBASIC17.5■□□□□ 0.39
NFKB1P19838 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 FGFR3P6-201ENST00000457012 610 ntBASIC17.5■□□□□ 0.39
NFKB1P19838 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.5■□□□□ 0.39
NFKB1P19838 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.5■□□□□ 0.39
NFKB1P19838 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
NFKB1P19838 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NFKB1P19838 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
NFKB1P19838 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NFKB1P19838 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.5■□□□□ 0.39
NFKB1P19838 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NFKB1P19838 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NFKB1P19838 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms