Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
DEFA4P12838 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.06□□□□□ -0.16
DEFA4P12838 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.06□□□□□ -0.16
DEFA4P12838 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
DEFA4P12838 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 HBZP1-201ENST00000354915 429 ntBASIC14.06□□□□□ -0.16
DEFA4P12838 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.06□□□□□ -0.16
DEFA4P12838 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.06□□□□□ -0.16
DEFA4P12838 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
DEFA4P12838 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.06□□□□□ -0.16
DEFA4P12838 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
DEFA4P12838 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.06□□□□□ -0.16
DEFA4P12838 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.06□□□□□ -0.16
DEFA4P12838 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.06□□□□□ -0.16
DEFA4P12838 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
DEFA4P12838 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
DEFA4P12838 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
DEFA4P12838 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
DEFA4P12838 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.06□□□□□ -0.16
DEFA4P12838 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DEFA4P12838 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
DEFA4P12838 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA4P12838 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
DEFA4P12838 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
DEFA4P12838 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
DEFA4P12838 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
DEFA4P12838 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA4P12838 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA4P12838 MIR662-201ENST00000384847 95 ntBASIC14.05□□□□□ -0.16
DEFA4P12838 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA4P12838 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.05□□□□□ -0.16
DEFA4P12838 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA4P12838 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.05□□□□□ -0.16
DEFA4P12838 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.05□□□□□ -0.16
DEFA4P12838 AC112698.1-201ENST00000510299 916 ntBASIC14.05□□□□□ -0.16
DEFA4P12838 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.05□□□□□ -0.16
DEFA4P12838 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.05□□□□□ -0.16
DEFA4P12838 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA4P12838 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA4P12838 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
DEFA4P12838 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.05□□□□□ -0.16
DEFA4P12838 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 AC060834.1-201ENST00000443027 2032 ntBASIC14.05□□□□□ -0.16
DEFA4P12838 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.05□□□□□ -0.16
DEFA4P12838 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.05□□□□□ -0.16
DEFA4P12838 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
DEFA4P12838 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
DEFA4P12838 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
DEFA4P12838 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
DEFA4P12838 HYMAI-201ENST00000635591 3347 ntBASIC14.04□□□□□ -0.16
DEFA4P12838 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DEFA4P12838 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms