Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.06■□□□□ 0.16
TPRP12270 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.06■□□□□ 0.16
TPRP12270 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.06■□□□□ 0.16
TPRP12270 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TPRP12270 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRP12270 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRP12270 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRP12270 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TPRP12270 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TPRP12270 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRP12270 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.06■□□□□ 0.16
TPRP12270 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
TPRP12270 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRP12270 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.06■□□□□ 0.16
TPRP12270 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRP12270 AL158211.5-201ENST00000623583 2518 ntBASIC16.06■□□□□ 0.16
TPRP12270 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
TPRP12270 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TPRP12270 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPRP12270 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPRP12270 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.06■□□□□ 0.16
TPRP12270 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRP12270 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.06■□□□□ 0.16
TPRP12270 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.06■□□□□ 0.16
TPRP12270 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.06■□□□□ 0.16
TPRP12270 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.06■□□□□ 0.16
TPRP12270 MIR3615-201ENST00000581999 87 ntBASIC16.06■□□□□ 0.16
TPRP12270 AL021578.1-201ENST00000613646 709 ntBASIC16.06■□□□□ 0.16
TPRP12270 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRP12270 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPRP12270 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPRP12270 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.06■□□□□ 0.16
TPRP12270 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TPRP12270 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.05■□□□□ 0.16
TPRP12270 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TPRP12270 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TPRP12270 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.05■□□□□ 0.16
TPRP12270 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.05■□□□□ 0.16
TPRP12270 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.05■□□□□ 0.16
TPRP12270 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.05■□□□□ 0.16
TPRP12270 SPCS2P2-201ENST00000603270 608 ntBASIC16.05■□□□□ 0.16
TPRP12270 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TPRP12270 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.05■□□□□ 0.16
TPRP12270 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.05■□□□□ 0.16
TPRP12270 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.05■□□□□ 0.16
TPRP12270 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.05■□□□□ 0.16
TPRP12270 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.05■□□□□ 0.16
TPRP12270 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.05■□□□□ 0.16
TPRP12270 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.05■□□□□ 0.16
TPRP12270 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.05■□□□□ 0.16
TPRP12270 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPRP12270 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TPRP12270 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.04■□□□□ 0.16
TPRP12270 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPRP12270 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TPRP12270 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.04■□□□□ 0.16
TPRP12270 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.04■□□□□ 0.16
TPRP12270 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRP12270 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPRP12270 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.04■□□□□ 0.16
TPRP12270 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.04■□□□□ 0.16
TPRP12270 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.04■□□□□ 0.16
TPRP12270 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.04■□□□□ 0.16
TPRP12270 RPSAP52-203ENST00000622976 1023 ntBASIC16.04■□□□□ 0.16
TPRP12270 AL645728.2-201ENST00000641974 660 ntBASIC16.04■□□□□ 0.16
TPRP12270 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TPRP12270 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRP12270 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRP12270 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPRP12270 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPRP12270 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TPRP12270 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPRP12270 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPRP12270 RPS2P36-201ENST00000456516 831 ntBASIC16.04■□□□□ 0.16
TPRP12270 AC108725.1-201ENST00000495472 409 ntBASIC16.04■□□□□ 0.16
TPRP12270 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.04■□□□□ 0.16
TPRP12270 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.04■□□□□ 0.16
TPRP12270 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPRP12270 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
TPRP12270 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPRP12270 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms